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GCLiPP: global crosslinking and protein purification method for constructing high-resolution occupancy maps for RNA binding proteins.
Genome Biol. 2023 Dec 7;24(1):281. doi: 10.1186/s13059-023-03125-2.
Genome Biol. 2023.
PMID: 38062486
Free PMC article.
PICS2: next-generation fine mapping via probabilistic identification of causal SNPs.
Taylor KE, Ansel KM, Marson A, Criswell LA, Farh KK.
Taylor KE, et al.
Bioinformatics. 2021 Sep 29;37(18):3004-3007. doi: 10.1093/bioinformatics/btab122.
Bioinformatics. 2021.
PMID: 33624747
Free PMC article.
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A massively parallel 3' UTR reporter assay reveals relationships between nucleotide content, sequence conservation, and mRNA destabilization.
Litterman AJ, Kageyama R, Le Tonqueze O, Zhao W, Gagnon JD, Goodarzi H, Erle DJ, Ansel KM.
Litterman AJ, et al.
Genome Res. 2019 Jun;29(6):896-906. doi: 10.1101/gr.242552.118. Epub 2019 May 31.
Genome Res. 2019.
PMID: 31152051
Free PMC article.
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