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Page 1
Quantitative phenotyping via deep barcode sequencing.
Smith AM, Heisler LE, Mellor J, Kaper F, Thompson MJ, Chee M, Roth FP, Giaever G, Nislow C. Smith AM, et al. Genome Res. 2009 Oct;19(10):1836-42. doi: 10.1101/gr.093955.109. Epub 2009 Jul 21. Genome Res. 2009. PMID: 19622793 Free PMC article.
Next-generation sequencing to generate interactome datasets.
Yu H, Tardivo L, Tam S, Weiner E, Gebreab F, Fan C, Svrzikapa N, Hirozane-Kishikawa T, Rietman E, Yang X, Sahalie J, Salehi-Ashtiani K, Hao T, Cusick ME, Hill DE, Roth FP, Braun P, Vidal M. Yu H, et al. Nat Methods. 2011 Jun;8(6):478-80. doi: 10.1038/nmeth.1597. Epub 2011 Apr 24. Nat Methods. 2011. PMID: 21516116 Free PMC article.
Pooled-matrix protein interaction screens using Barcode Fusion Genetics.
Yachie N, Petsalaki E, Mellor JC, Weile J, Jacob Y, Verby M, Ozturk SB, Li S, Cote AG, Mosca R, Knapp JJ, Ko M, Yu A, Gebbia M, Sahni N, Yi S, Tyagi T, Sheykhkarimli D, Roth JF, Wong C, Musa L, Snider J, Liu YC, Yu H, Braun P, Stagljar I, Hao T, Calderwood MA, Pelletier L, Aloy P, Hill DE, Vidal M, Roth FP. Yachie N, et al. Mol Syst Biol. 2016 Apr 22;12(4):863. doi: 10.15252/msb.20156660. Mol Syst Biol. 2016. PMID: 27107012 Free PMC article.
Mapping DNA damage-dependent genetic interactions in yeast via party mating and barcode fusion genetics.
Díaz-Mejía JJ, Celaj A, Mellor JC, Coté A, Balint A, Ho B, Bansal P, Shaeri F, Gebbia M, Weile J, Verby M, Karkhanina A, Zhang Y, Wong C, Rich J, Prendergast D, Gupta G, Öztürk S, Durocher D, Brown GW, Roth FP. Díaz-Mejía JJ, et al. Mol Syst Biol. 2018 May 28;14(5):e7985. doi: 10.15252/msb.20177985. Mol Syst Biol. 2018. PMID: 29807908 Free PMC article.
Systematic exploration of synergistic drug pairs.
Cokol M, Chua HN, Tasan M, Mutlu B, Weinstein ZB, Suzuki Y, Nergiz ME, Costanzo M, Baryshnikova A, Giaever G, Nislow C, Myers CL, Andrews BJ, Boone C, Roth FP. Cokol M, et al. Mol Syst Biol. 2011 Nov 8;7:544. doi: 10.1038/msb.2011.71. Mol Syst Biol. 2011. PMID: 22068327 Free PMC article.