U01 CA180980/CA/NCI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2015	4
2016	11
2017	7
2018	2
2019	3
2024	0

1

Comprehensive analyses of tumor immunity: implications for cancer immunotherapy.

Li B, Severson E, Pignon JC, Zhao H, Li T, Novak J, Jiang P, Shen H, Aster JC, Rodig S, Signoretti S, Liu JS, Liu XS. Li B, et al. Genome Biol. 2016 Aug 22;17(1):174. doi: 10.1186/s13059-016-1028-7. Genome Biol. 2016. PMID: 27549193 Free PMC article.

2

Sequence determinants of improved CRISPR sgRNA design.

Xu H, Xiao T, Chen CH, Li W, Meyer CA, Wu Q, Wu D, Cong L, Zhang F, Liu JS, Brown M, Liu XS. Xu H, et al. Genome Res. 2015 Aug;25(8):1147-57. doi: 10.1101/gr.191452.115. Epub 2015 Jun 10. Genome Res. 2015. PMID: 26063738 Free PMC article.

3

TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells.

Li T, Fan J, Wang B, Traugh N, Chen Q, Liu JS, Li B, Liu XS. Li T, et al. Cancer Res. 2017 Nov 1;77(21):e108-e110. doi: 10.1158/0008-5472.CAN-17-0307. Cancer Res. 2017. PMID: 29092952 Free PMC article.

4

Applications of Immunogenomics to Cancer.

Liu XS, Mardis ER. Liu XS, et al. Cell. 2017 Feb 9;168(4):600-612. doi: 10.1016/j.cell.2017.01.014. Cell. 2017. PMID: 28187283 Free PMC article. Review.

5

Landscape of tumor-infiltrating T cell repertoire of human cancers.

Li B, Li T, Pignon JC, Wang B, Wang J, Shukla SA, Dou R, Chen Q, Hodi FS, Choueiri TK, Wu C, Hacohen N, Signoretti S, Liu JS, Liu XS. Li B, et al. Nat Genet. 2016 Jul;48(7):725-32. doi: 10.1038/ng.3581. Epub 2016 May 30. Nat Genet. 2016. PMID: 27240091 Free PMC article.

6

Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis.

Zheng R, Wan C, Mei S, Qin Q, Wu Q, Sun H, Chen CH, Brown M, Zhang X, Meyer CA, Liu XS. Zheng R, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D729-D735. doi: 10.1093/nar/gky1094. Nucleic Acids Res. 2019. PMID: 30462313 Free PMC article.

7

ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline.

Qin Q, Mei S, Wu Q, Sun H, Li L, Taing L, Chen S, Li F, Liu T, Zang C, Xu H, Chen Y, Meyer CA, Zhang Y, Brown M, Long HW, Liu XS. Qin Q, et al. BMC Bioinformatics. 2016 Oct 3;17(1):404. doi: 10.1186/s12859-016-1274-4. BMC Bioinformatics. 2016. PMID: 27716038 Free PMC article.

8

Inference of transcriptional regulation in cancers.

Jiang P, Freedman ML, Liu JS, Liu XS. Jiang P, et al. Proc Natl Acad Sci U S A. 2015 Jun 23;112(25):7731-6. doi: 10.1073/pnas.1424272112. Epub 2015 Jun 8. Proc Natl Acad Sci U S A. 2015. PMID: 26056275 Free PMC article.

9

Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles.

Wang S, Zang C, Xiao T, Fan J, Mei S, Qin Q, Wu Q, Li X, Xu K, He HH, Brown M, Meyer CA, Liu XS. Wang S, et al. Genome Res. 2016 Oct;26(10):1417-1429. doi: 10.1101/gr.201574.115. Epub 2016 Jul 27. Genome Res. 2016. PMID: 27466232 Free PMC article.

10

Cistrome Cancer: A Web Resource for Integrative Gene Regulation Modeling in Cancer.

Mei S, Meyer CA, Zheng R, Qin Q, Wu Q, Jiang P, Li B, Shi X, Wang B, Fan J, Shih C, Brown M, Zang C, Liu XS. Mei S, et al. Cancer Res. 2017 Nov 1;77(21):e19-e22. doi: 10.1158/0008-5472.CAN-17-0327. Cancer Res. 2017. PMID: 29092931 Free PMC article.

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