Application of cybernetic models to metabolic engineering: investigation of storage pathways

Biotechnol Bioeng. 1998 Apr 5;58(2-3):282-91. doi: 10.1002/(sici)1097-0290(19980420)58:2/3<282::aid-bit24>3.0.co;2-d.

Abstract

A cybernetic model is proposed to examine generic features of storage pathways. This model is capable of describing synthesis of carbon and non-carbon storage polymers. The effect of environmental conditions is evaluated using storage polymer level as a fraction of total biomass as a gauge of pathway performance. The base wild-type pathway is then analyzed to determine the effect of genetic alterations upon system performance. Proposed modifications are tested using the cybernetic model as a diagnostic tool to ascertain the ramifications of potential genetic alterations. A methodology is developed within the cybernetic framework to describe alterations of enzyme activity and over-expression of pathway enzymes. Copyright 1998 John Wiley & Sons, Inc.