Structural and functional analysis of pCI65st, a 6.5 kb plasmid from Streptococcus thermophilus NDI-6

Microbiology (Reading). 1999 Jan:145 ( Pt 1):127-134. doi: 10.1099/13500872-145-1-127.

Abstract

The 6.5 kb cryptic plasmid pCI65st from Streptococcus thermophilus NDI-6, a strain isolated from the Indian fermented milk dahi, was subcloned and sequenced. Five putative ORFs were identified. ORF1 could encode a 315 aa polypeptide almost identical to the RepA protein of previously sequenced S. thermophilus plasmids, indicating that pCI65st is one of the pC194 group of small gram-positive rolling-circle plasmids. ORFs 2 and 4 were virtually identical and could specify proteins of approximately 150 aa with significant similarity to the small heat-shock proteins described from a variety of gram-positive bacteria. ORF3 could encode a 415 aa protein similar to enolase, an enzyme involved in glycolysis and gluconeogenesis. ORF5 could encode a 412 aa protein which had high similarity to the HsdS (specificity) proteins of type I restriction-modification systems. Variants of strain NDI-6 which lacked pCI65st were readily isolated after subculture of the parent strain at 32 degrees C. The plasmid-bearing parent culture was significantly more resistant to a temperature shift from 42 degrees C to 62 degrees C than its plasmid-free variant and expressed proteins which corresponded with the predicted translation products from ORF2 and ORF4. In addition, plasmid-free mutants were lysed in broth by bacteriophages to which the parent culture was resistant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacteriolysis
  • Cloning, Molecular*
  • DNA Helicases*
  • DNA Restriction-Modification Enzymes / chemistry
  • DNA Restriction-Modification Enzymes / genetics
  • DNA-Binding Proteins*
  • Electrophoresis, Polyacrylamide Gel
  • Genes, Bacterial / genetics
  • Genetic Variation / genetics
  • Gram-Positive Bacteria / genetics
  • Heat-Shock Proteins / chemistry
  • Heat-Shock Proteins / genetics
  • Heat-Shock Proteins / metabolism
  • Heat-Shock Response
  • Molecular Sequence Data
  • Molecular Weight
  • Open Reading Frames / genetics
  • Phosphopyruvate Hydratase / chemistry
  • Phosphopyruvate Hydratase / genetics
  • Phosphopyruvate Hydratase / metabolism
  • Plasmids / genetics*
  • Plasmids / physiology
  • Proteins / chemistry
  • Proteins / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Streptococcus / enzymology
  • Streptococcus / genetics*
  • Streptococcus / physiology
  • Streptococcus / virology
  • Streptococcus Phages / physiology
  • Trans-Activators*

Substances

  • Bacterial Proteins
  • DNA Restriction-Modification Enzymes
  • DNA-Binding Proteins
  • HSDS protein, Bacteria
  • Heat-Shock Proteins
  • Proteins
  • Trans-Activators
  • replication initiator protein
  • DNA Helicases
  • Phosphopyruvate Hydratase

Associated data

  • GENBANK/AF027167