A comparative study of rat and human Tmp21 (p23) reveals the pseudogene-like features of human Tmp21-II

DNA Seq. 1999;10(2):121-6. doi: 10.3109/10425179909008429.

Abstract

Tmp21 (p23) is involved in biosynthetic transport from the endoplasmic reticulum to the Golgi complex. We have recently characterized two cDNA-variants of human Tmp21, the Tmp21-isoforms-I and -II. Because of the lack of cDNA sequence data and protein expression data, it was not clear if Tmp21-II encodes a functional Tmp21-protein. Here we describe the cloning of the full length human Tmp21-II transcript. The putative open reading frame of Tmp21-II contains a reading frame jump and a nonsense mutation in comparison to all other Tmp21-I (p23) members. Our data indicate that hum-Tmp21-II is transcribed, but not translated. We conclude that Tmp21-II cDNA derives from a neutral pseudogene, which originates from a duplication event of the human Tmp21-isoform-I.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cricetinae
  • DNA, Complementary
  • Humans
  • Membrane Proteins / genetics*
  • Molecular Sequence Data
  • Nucleocytoplasmic Transport Proteins
  • Protein Isoforms / genetics
  • Rats

Substances

  • DNA, Complementary
  • Membrane Proteins
  • Nucleocytoplasmic Transport Proteins
  • Protein Isoforms
  • TMED10 protein, human
  • TMED10P1 protein, human
  • Tmed10 protein, rat

Associated data

  • GENBANK/AJ004912
  • GENBANK/AJ004913
  • GENBANK/AJ004914