ITS sequence data resolve higher level relationships among the eucalypts

Mol Phylogenet Evol. 1999 Jul;12(2):215-23. doi: 10.1006/mpev.1999.0612.

Abstract

Sequences of the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA were obtained for 35 species of Eucalyptus s.s. and seven taxa representing five outgroup genera (Allosyncarpia, Angophora, Arillastrum, Corymbia, and Stockwellia). The sequences were analyzed cladistically. The data distinguished clearly between the two major subgenera of Eucalyptus s.s. (Symphyomyrtus and Monocalyptus) but indicated that subgenus Eudesmia may be paraphyletic. ITS sequence data demonstrated the potential to resolve relationships between sections within subgenus Symphyomyrtus. Within sections, however, taxa were poorly differentiated. At the generic level, Corymbia appeared to be paraphyletic due to the exclusion of Angophora. The positions of Allosyncarpia and Arillastrum relative to the ingroup remain unresolved. ITS sequence data may prove valuable for resolving other phylogenetic relationships at higher taxonomic levels within Eucalyptus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Ribosomal / genetics*
  • Eucalyptus / classification
  • Eucalyptus / genetics*
  • Evolution, Molecular*
  • Genes, Plant / genetics
  • Genetic Variation / genetics
  • Molecular Sequence Data
  • Phylogeny*
  • Plants, Medicinal*
  • RNA, Ribosomal, 5.8S / genetics
  • Rosales / classification
  • Rosales / genetics*
  • Sensitivity and Specificity
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Deletion

Substances

  • DNA, Ribosomal
  • RNA, Ribosomal, 5.8S

Associated data

  • GENBANK/AF058452
  • GENBANK/AF058453
  • GENBANK/AF058454
  • GENBANK/AF058455
  • GENBANK/AF058456
  • GENBANK/AF058457
  • GENBANK/AF058458
  • GENBANK/AF058459
  • GENBANK/AF058460
  • GENBANK/AF058461
  • GENBANK/AF058462
  • GENBANK/AF058463
  • GENBANK/AF058464
  • GENBANK/AF058465
  • GENBANK/AF058466
  • GENBANK/AF058467
  • GENBANK/AF058468
  • GENBANK/AF058469
  • GENBANK/AF058470
  • GENBANK/AF058471
  • GENBANK/AF058472
  • GENBANK/AF058473
  • GENBANK/AF058474
  • GENBANK/AF058475
  • GENBANK/AF058476
  • GENBANK/AF058477
  • GENBANK/AF058478
  • GENBANK/AF058479
  • GENBANK/AF058480
  • GENBANK/AF058481