Nucleotide sequence of exon 2 to 4 of the R-ras gene in the hermaphroditic fish Rivulus marmoratus

DNA Seq. 1998 Mar;8(4):229-34. doi: 10.3109/10425179809008456.

Abstract

We have cloned the ras homologue from the mangrove rivulus (Rivulus marmoratus) after low-stringency plaque hybridization of the mangrove rivulus genomic DNA library. This mangrove rivulus ras homologue showed a 76% amino acid homology to the human R(related)-ras gene with identical exon/intron boundary and was named the mangrove rivulus R-ras gene. The mangrove rivulus R-ras gene spanned 1.8 kb and consisted of at least 5 exons. The exon/intron boundaries coincided with the rule of GT/AG of consensus splice acceptor and donor sequences. To our knowledge this is the first report that fish also have the R-ras gene with identical exon/intron boundaries and extensive homology with human.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cyprinodontiformes / genetics*
  • Exons / genetics*
  • GTP Phosphohydrolases / chemistry
  • GTP Phosphohydrolases / genetics*
  • Genes, ras*
  • Hermaphroditic Organisms
  • Humans
  • Molecular Sequence Data
  • Restriction Mapping
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sex Determination Processes
  • ras Proteins / chemistry
  • ras Proteins / genetics*

Substances

  • GTP Phosphohydrolases
  • RRAS protein, human
  • ras Proteins

Associated data

  • GENBANK/X95440
  • GENBANK/X95441