Dipole lattice membrane model for protein calculations

Proteins. 2000 Nov 1;41(2):211-23. doi: 10.1002/1097-0134(20001101)41:2<211::aid-prot60>3.0.co;2-9.

Abstract

A dipole lattice model for lipid membranes and their interactions with peptides is presented. It uses the Langevin dipole method to calculate electrostatic interactions in the heterogeneous membrane environment. A series of test cases are presented, including spherical charges, dipoles, side chain analogs, and helical peptides. The model consistently produces qualitatively correct results.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alamethicin / chemistry
  • Alamethicin / metabolism
  • Membrane Lipids / chemistry
  • Membrane Lipids / metabolism
  • Membrane Proteins / chemistry*
  • Membrane Proteins / metabolism
  • Membranes / chemistry
  • Models, Biological*
  • Peptides / chemistry
  • Peptides / metabolism
  • Reproducibility of Results
  • Static Electricity
  • Thermodynamics

Substances

  • Membrane Lipids
  • Membrane Proteins
  • Peptides
  • Alamethicin