Inhibition of Tat-mediated transactivation of HIV-1 LTR transcription by polyamide nucleic acid targeted to TAR hairpin element

Biochemistry. 2000 Sep 26;39(38):11532-9. doi: 10.1021/bi000708q.

Abstract

Tat, an essential human immunodeficiency virus type 1 protein interacts with the transactivation response element (TAR) and stimulates transcription from the viral long-terminal repeat (LTR). Blockage of Tat-TAR interaction halts viral transcription and hence replication. We have found that polyamide nucleic acid (PNA), targeted to the TAR sequences of viral RNA genome is able to prevent Tat-TAR interaction by efficient sequestration of the TAR. Anti-TAR PNA competes for TAR and prevents Tat-mediated stimulation of HIV-1 LTR transcription in vitro but has no influence on the basal level of transcription in the absence of Tat. Using a reporter gene construct pHIV LTR-CAT and pCMV-Tat in cell culture, we have further shown that anti-TAR PNA is able to block Tat-mediated transactivation of HIV-1 LTR transcription in vivo as judged by the extent of LTR driven CAT gene expression in the absence and presence of anti-TAR PNA. Supplementation of 100 nM of anti-TAR PNA into the culture medium further enhances the suppression of transactivation. Nonspecific scrambled PNA had no influence on Tat-TAR interaction and LTR-driven CAT gene expression in cell culture. These results suggest that PNA targeted to the TAR sequence of the viral genome may be a potential inhibitor of HIV-1 gene expression.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Antiviral Agents / chemistry*
  • Antiviral Agents / metabolism
  • Base Sequence
  • Binding Sites / genetics
  • Cell Line
  • Chloramphenicol O-Acetyltransferase / antagonists & inhibitors
  • Chloramphenicol O-Acetyltransferase / biosynthesis
  • Chloramphenicol O-Acetyltransferase / genetics
  • Gene Products, tat / antagonists & inhibitors*
  • Gene Products, tat / chemistry*
  • Gene Products, tat / genetics
  • HIV Long Terminal Repeat*
  • HIV-1 / genetics
  • HeLa Cells
  • Humans
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Peptide Nucleic Acids / chemistry*
  • Peptide Nucleic Acids / metabolism
  • RNA, Viral / antagonists & inhibitors*
  • RNA, Viral / genetics
  • RNA, Viral / metabolism
  • Response Elements / genetics*
  • Transcription, Genetic*
  • Transcriptional Activation*
  • Transfection
  • tat Gene Products, Human Immunodeficiency Virus

Substances

  • Antiviral Agents
  • Gene Products, tat
  • Peptide Nucleic Acids
  • RNA, Viral
  • tat Gene Products, Human Immunodeficiency Virus
  • Chloramphenicol O-Acetyltransferase