Rat tapasin: cDNA cloning and identification as a component of the class I MHC assembly complex

Genes Immun. 2001 Feb;2(1):48-51. doi: 10.1038/sj.gene.6363727.

Abstract

During the assembly of major histocompatibility complex (MHC) class I molecules transient associations are formed with the endoplasmic reticulum resident chaperones calnexin and calreticulin, ERp57 oxidoreductase, and also with tapasin, the latter mediating binding of the class I molecules to the transporter associated with antigen processing (TAP). We report here the isolation of a cDNA encoding rat tapasin from a DA (RT1av1) library. The cDNA encodes a proline-rich (11.3%) polypeptide of 464 residues with a potential ER-retention KK motif at its COOH-terminus, and a predicted molecular mass of 48 kDa. Matrix-assisted laser-desorption ionisation (MALDI) mass spectrometry of peptides derived from in-gel tryptic digestion of a TAP-associated protein match regions of the predicted translation product. A species of the correct molecular mass and predicted pl was also identified in association with radiolabelled immunoprecipitates of the rat TAP complex analysed by two-dimensional gel electrophoresis. This confirms rat tapasin as a component of the rat MHC class I assembly complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antiporters / genetics*
  • Cloning, Molecular
  • DNA, Complementary
  • Electrophoresis, Gel, Two-Dimensional
  • Histocompatibility Antigens Class I / genetics*
  • Humans
  • Immunoglobulins / genetics*
  • Membrane Transport Proteins
  • Mice
  • Molecular Sequence Data
  • Rats
  • Sequence Homology, Amino Acid

Substances

  • Antiporters
  • DNA, Complementary
  • Histocompatibility Antigens Class I
  • Immunoglobulins
  • Membrane Transport Proteins
  • tapasin

Associated data

  • GENBANK/AJ400732