Metal ion inhibition of nonenzymatic pyridoxal phosphate catalyzed decarboxylation and transamination

J Am Chem Soc. 2001 Jan 17;123(2):193-8. doi: 10.1021/ja0026354.

Abstract

Nonenzymatic pyridoxal phosphate (PLP) catalyzed decarboxylations and transaminations have been revisited experimentally. Metal ions are known to catalyze a variety of PLP-dependent reactions in solution, including transamination. It is demonstrated here that the rate accelerations previously observed are due solely to enhancement of Schiff base formation under subsaturating conditions. A variety of metal ions were tested for their effects on the reactivity of the 2-methyl-2-aminomalonate Schiff bases. All were found to have either no effect or a small inhibitory one. The effects of Al(3+) were studied in detail with the Schiff bases of 2-methyl-2-aminomalonate, 2-aminoisobutyrate, alanine, and ethylamine. The decarboxylation of 2-methyl-2-aminomalonate is unaffected by metalation with Al(3+), while the decarboxylation of 2-aminoisobutyrate is inhibited 125-fold. The transamination reaction of ethylamine is 75-fold slower than that of alanine. Ethylamine transamination is inhibited 4-fold by Al(3+) metalation, while alanine transamination is inhibited only 1.3-fold. Metal ion inhibition of Schiff base reactivity suggests a simple explanation for the lack of known PLP dependent enzymes that make direct mechanistic use of metal ions. A comparison of enzyme catalyzed, PLP catalyzed, and uncatalyzed reactions shows that PLP dependent decarboxylases are among the best known biological rate enhancers: decarboxylation occurs 10(18)-fold faster on the enzyme surface than it does free in solution. PLP itself provides the lion's share of the catalytic efficiency of the holoenzyme: at pH 8, free PLP catalyzes 2-aminoisobutyrate decarboxylation by approximately 10(10)-fold, with the enzyme contributing an additional approximately 10(8)-fold.

MeSH terms

  • Alanine / metabolism
  • Aluminum / antagonists & inhibitors
  • Aluminum / pharmacology
  • Amination / drug effects
  • Aminoisobutyric Acids / metabolism
  • Carboxy-Lyases / chemistry
  • Carboxy-Lyases / metabolism*
  • Catalysis
  • Cations
  • Decarboxylation / drug effects
  • Ethylamines / metabolism
  • Kinetics
  • Pyridoxal Phosphate / metabolism*

Substances

  • Aminoisobutyric Acids
  • Cations
  • Ethylamines
  • 2-aminoisobutyric acid
  • Pyridoxal Phosphate
  • Aluminum
  • Carboxy-Lyases
  • Alanine
  • ethylamine