Isolation and characterization of the human gene homologous to the Drosophila headcase (hdc) gene in chromosome bands 6q23-q24, a region of common deletion in human pancreatic cancer

DNA Seq. 2001;11(6):547-53. doi: 10.3109/10425170109041340.

Abstract

Deletions of the long arm of chromosome 6 (6q) are one of the most common chromosomal abnormalities in multiple human malignancies. Previously, we have identified three commonly deleted regions on 6q (6q21, 6q23-q24, and 6q26) in pancreatic cancer by loss of heterozygosity studies, suggesting the presence of one or more tumor suppressor genes on this chromosome arm. Using a combination of database search and cDNA library screening, we successfully isolated a transcript from 6q24. This mRNA encodes a protein consisting of 543 amino acids with homology to the Drosophila headcase (hdc) gene and, thus, is designated as hHDC. Northern analysis identified a ubiquitously expressed 5.6-kb transcript. Seventeen (81%) of 21 pancreatic cancer cell lines and four (80%) of five renal cell carcinoma cell lines showed low level expression, suggesting that the hHDC gene may play an important role in some human cancers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Chromosome Deletion*
  • Chromosomes, Human, Pair 6*
  • DNA, Complementary
  • Drosophila Proteins / genetics*
  • Drosophila melanogaster / genetics
  • Humans
  • Molecular Sequence Data
  • Neoplasm Proteins / genetics*
  • Pancreatic Neoplasms / genetics*
  • RNA, Messenger
  • Sequence Homology, Amino Acid
  • Tumor Cells, Cultured

Substances

  • DNA, Complementary
  • Drosophila Proteins
  • HECA protein, human
  • Hdc protein, Drosophila
  • Neoplasm Proteins
  • RNA, Messenger

Associated data

  • GENBANK/AB033492
  • GENBANK/AB033493
  • GENBANK/AB033494
  • GENBANK/AB033495
  • GENBANK/AB033496