Isolation from agricultural soil and characterization of a Sphingomonas sp. able to mineralize the phenylurea herbicide isoproturon

Appl Environ Microbiol. 2001 Dec;67(12):5403-9. doi: 10.1128/AEM.67.12.5403-5409.2001.

Abstract

A soil bacterium (designated strain SRS2) able to metabolize the phenylurea herbicide isoproturon, 3-(4-isopropylphenyl)-1,1-dimethylurea (IPU), was isolated from a previously IPU-treated agricultural soil. Based on a partial analysis of the 16S rRNA gene and the cellular fatty acids, the strain was identified as a Sphingomonas sp. within the alpha-subdivision of the proteobacteria. Strain SRS2 was able to mineralize IPU when provided as a source of carbon, nitrogen, and energy. Supplementing the medium with a mixture of amino acids considerably enhanced IPU mineralization. Mineralization of IPU was accompanied by transient accumulation of the metabolites 3-(4-isopropylphenyl)-1-methylurea, 3-(4-isopropylphenyl)-urea, and 4-isopropyl-aniline identified by high-performance liquid chromatography analysis, thus indicating a metabolic pathway initiated by two successive N-demethylations, followed by cleavage of the urea side chain and finally by mineralization of the phenyl structure. Strain SRS2 also transformed the dimethylurea-substituted herbicides diuron and chlorotoluron, giving rise to as-yet-unidentified products. In addition, no degradation of the methoxy-methylurea-substituted herbicide linuron was observed. This report is the first characterization of a pure bacterial culture able to mineralize IPU.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agriculture
  • Bacteriological Techniques
  • Biodegradation, Environmental
  • Culture Media
  • Herbicides / metabolism*
  • Methylurea Compounds / metabolism*
  • Phenylurea Compounds*
  • Soil Microbiology*
  • Soil Pollutants / metabolism*
  • Sphingomonas / classification
  • Sphingomonas / isolation & purification*
  • Sphingomonas / metabolism

Substances

  • Culture Media
  • Herbicides
  • Methylurea Compounds
  • Phenylurea Compounds
  • Soil Pollutants
  • isoproturon