Involvement of the second extracellular loop (E2) of the neurokinin-1 receptor in the binding of substance P. Photoaffinity labeling and modeling studies

J Biol Chem. 2002 Jun 21;277(25):22386-94. doi: 10.1074/jbc.M110614200. Epub 2002 Apr 11.

Abstract

Substance P (SP) interacts with the neurokinin-1 (NK-1) G-protein-coupled receptor, which has been cloned in several species. In the present study, the domains of the NK-1 receptor involved in the binding of SP and SP-(7-11) C-terminal fragment have been analyzed using two peptide analogs containing the photoreactive amino acid para-benzoylphenylalanine ((p-Bz)Phe) in position 8 of their sequence. This study was carried out with [BAPA-Lys(6),(p-Bz)Phe(8),Pro(9),Met(O(2))(11)]SP-(7-11) and [BAPA(0),(p-Bz)Phe(8)]SP on both rat and human NK-1 receptors expressed in CHO cells. Combined trypsin and endo-GluC enzymatic complete digestions and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis led to the identification of the same domain of covalent interaction, (173)TMPSR(177), for the two photoactivatable peptides. Further digestion of this fragment with carboxypeptidase Y led to the identification of (173)TMP(175) in the second extracellular loop (E2) of the NK-1 receptor as the site of covalent attachment. Models of the conformation of this E2 loop in the human NK-1 receptor were generated using two different strategies, one based on homology with bovine rhodopsin and the other based on the solution conformation preferences of a synthetic peptide corresponding to the E2 loop.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • CHO Cells
  • Carboxypeptidases / chemistry
  • Carboxypeptidases / metabolism
  • Cathepsin A
  • Cattle
  • Cell Membrane / metabolism
  • Cricetinae
  • Humans
  • Kinetics
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Molecular Sequence Data
  • Peptide Biosynthesis
  • Peptides / chemistry
  • Phenylalanine / analogs & derivatives*
  • Phenylalanine / chemistry
  • Protein Binding
  • Protein Conformation
  • Protein Structure, Tertiary
  • Rats
  • Receptors, Neurokinin-1 / chemistry*
  • Receptors, Neurokinin-1 / metabolism
  • Rhodopsin / chemistry
  • Salicylates
  • Sequence Homology, Amino Acid
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Streptavidin / pharmacology
  • Substance P / chemistry*
  • Substance P / metabolism
  • Trypsin / pharmacology

Substances

  • Peptides
  • Receptors, Neurokinin-1
  • Salicylates
  • Substance P
  • Phenylalanine
  • 4-benzoylsalicylic acid
  • Rhodopsin
  • Streptavidin
  • benzoylphenylalanine
  • Carboxypeptidases
  • CTSA protein, human
  • Cathepsin A
  • Trypsin