Structural features and conformational equilibria of 310-helical peptides in solution by spectroscopic and molecular mechanics studies

Biopolymers. 2002;67(4-5):247-50. doi: 10.1002/bip.10118.

Abstract

The structural features and conformational equilibria of a series of short, linear Calpha-methylvaline [(alphaMe)Val]-based peptides in methanol were investigated by combining fluorescence resonance energy transfer measurements and molecular mechanics data. IR spectra were employed to determine their secondary structure, which exhibits an intramolecularly H-bonded, 3(10)-helix conformation that is affected by backbone distortions that are enhanced by the shortness of the main chain.

MeSH terms

  • Models, Chemical
  • Models, Molecular
  • Peptides / chemistry*
  • Protein Binding
  • Protein Conformation
  • Software
  • Spectrometry, Fluorescence
  • Spectrophotometry / methods*
  • Time Factors

Substances

  • Peptides