Sequence and phylogenetic analysis of hepatitis B virus genotype G isolated in Germany

Virus Genes. 2002 Mar;24(2):153-6. doi: 10.1023/a:1014572600432.

Abstract

Genotype G of hepatitis B virus (HBV) has only recently been discovered. This report describes the full-length sequence of genotype G HBV (designated 235/01) isolated in Germany from a chronic HBV carrier. The patient was hepatitis B e antigen-positive, had high HBV DNA levels of about 10(10) copies/ml serum, lacked a measurable anti-HBc response, and was coinfected with human immunodeficiency virus type 1. Genome 235/01 showed characteristic genotype G-specific features: stop codons at codon 2 and 28 of the pre-C region and insertion of 36 nucleotides at the 5' end of the C gene. It was nearly identical (< or = 99.7% identity) to both genotype G genomes (B1-89 and FR1 from France) described so far, suggesting either close epidemiological link among European genotype G isolates or high genetic stability of genotype G.

MeSH terms

  • DNA, Viral / analysis
  • Genetic Variation
  • Genome, Viral*
  • Genotype
  • Germany
  • HIV Infections / complications
  • HIV-1
  • Hepatitis B virus / classification*
  • Hepatitis B virus / genetics
  • Hepatitis B virus / isolation & purification
  • Hepatitis B, Chronic / complications
  • Hepatitis B, Chronic / virology*
  • Humans
  • Male
  • Molecular Sequence Data
  • Phylogeny*
  • Sequence Analysis, DNA*

Substances

  • DNA, Viral

Associated data

  • GENBANK/AF405706