The cross-reactive calcium-binding pollen allergen, Phl p 7, reveals a novel dimer assembly

EMBO J. 2002 Oct 1;21(19):5007-16. doi: 10.1093/emboj/cdf526.

Abstract

The timothy grass pollen allergen Phl p 7 assembles most of the IgE epitopes of a novel family of 2 EF-hand calcium-binding proteins and therefore represents a diagnostic marker allergen and vaccine candidate for immunotherapy. Here we report the first three-dimensional structure of a representative of the 2 EF-hand allergen family, Phl p 7, in the calcium-bound form. The protein occurs as a novel dimer assembly with unique features: in contrast to well known EF-hand proteins such as calmodulin, parvalbumin or the S100 proteins, Phl p 7 adopts an extended conformation. Two protein monomers assemble in a head-to-tail arrangement with domain-swapped EF-hand pairing. The intertwined dimer adopts a barrel-like structure with an extended hydrophobic cavity providing a ligand-binding site. Calcium binding acts as a conformational switch between an open and a closed dimeric form of Phl p 7. These findings are interesting in the context of lipid- and calcium-dependent pollen tube growth. Furthermore, the structure of Phl p 7 allows for the rational development of vaccine strategies for treatment of sensitized allergic patients.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allergens / chemistry*
  • Amino Acid Sequence
  • Antigens, Plant
  • Calcium-Binding Proteins / chemistry*
  • Dimerization
  • Drug Design
  • Models, Molecular
  • Molecular Sequence Data
  • Phleum / chemistry*
  • Plant Proteins / chemistry*
  • Protein Conformation
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Vaccines

Substances

  • Allergens
  • Antigens, Plant
  • Calcium-Binding Proteins
  • Phl p 7 allergen
  • Plant Proteins
  • Vaccines

Associated data

  • PDB/1K9U