Site-directed mutagenesis of dimethyl sulfoxide reductase from Rhodobacter capsulatus: characterization of a Y114 --> F mutant

Biochemistry. 2002 Dec 31;41(52):15762-9. doi: 10.1021/bi0266582.

Abstract

A system for expressing site-directed mutants of the molybdenum enzyme dimethyl sulfoxide reductase from Rhodobacter capsulatus in the natural host was constructed. This system was used to generate and express dimethyl sulfoxide reductase with a Y114F mutation. The Y114F mutant had an increased k(cat) and increased K(m) toward both dimethyl sulfoxide and trimethylamine N-oxide compared to the native enzyme, and the value of k(cat)/K(m) was lower for both substrates in the mutant enzyme. The Y114F mutant, as isolated, was able to oxidize dimethyl sulfide with phenazine ethosulfate as the electron acceptor but with a lower k(cat) than that of the native enzyme. The pH optimum of dimethyl sulfide:acceptor oxidoreductase activity in the Y114F mutant was shown to be shifted by +1 pH unit compared to the native enzyme. The Y114F mutant did not form a pink complex with dimethyl sulfide, which is characteristic of the native enzyme. The mutant enzyme showed a large increase in the K(d) for DMS. Direct electrochemistry showed that the Mo(V)/Mo(IV) couple was unaffected by the Y114F mutant, but the midpoint potential of the Mo(VI)/Mo(V) couple was raised by about 50 mV. These data confirm that the Y114 residue plays a critical role in oxidation-reduction processes at the molybdenum active site and in oxygen atom transfer associated with sulfoxide reduction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution / genetics*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Binding Sites / genetics
  • Dimethyl Sulfoxide / chemistry
  • Electrochemistry
  • Hydrogen-Ion Concentration
  • Iron-Sulfur Proteins*
  • Kinetics
  • Molybdenum / chemistry
  • Mutagenesis, Site-Directed*
  • Oxidation-Reduction
  • Oxidoreductases / biosynthesis
  • Oxidoreductases / chemistry*
  • Oxidoreductases / genetics*
  • Phenylalanine / chemistry
  • Phenylalanine / genetics*
  • Protein Binding / genetics
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / chemical synthesis
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Rhodobacter capsulatus / enzymology*
  • Rhodobacter capsulatus / genetics*
  • Spectrophotometry, Ultraviolet
  • Tyrosine / chemistry
  • Tyrosine / genetics*

Substances

  • Bacterial Proteins
  • Iron-Sulfur Proteins
  • Recombinant Proteins
  • Tyrosine
  • Phenylalanine
  • Molybdenum
  • Oxidoreductases
  • dimethyl sulfoxide reductase
  • Dimethyl Sulfoxide