False negative HIV-1 proviral DNA polymerase chain reaction in a patient with primary infection acquired in Thailand

J Clin Virol. 2003 Feb;26(2):163-9. doi: 10.1016/s1386-6532(02)00115-4.

Abstract

Background: Qualitative HIV-1 proviral DNA PCR tests have three main diagnostic applications. These include direct detection of viral sequences in the pre-seroconversion window period which may be positive up to 8 days prior to the development of HIV specific antibodies; resolution of indeterminate HIV serological tests and in the diagnosis of neonates born to seropositive mothers where maternal antibodies may be detectable for up to 15 months past partum.

Methods: A total of three serial specimens from a single patient following symptomatic primary HIV-1 infection were assessed by commercially available serological assays for antibodies to HIV and HIV-1 antigen and nucleic acid amplification assays for proviral DNA (Amplicor HIV-1 test, Roche Molecular Systems, CA, USA) and RNA (HIV MONITOR ver1.5, Roche Molecular Systems) according to manufacturers recommendations. A subsequent modified PCR protocol for HIV proviral DNA was performed which included modified primers (SK145/SKCC1B) and altered thermal cycling parameters.

Results: We describe a case of HIV infection acquired in Thailand by heterosexual transmission, where a commercially available HIV proviral DNA PCR assay remained negative despite a typical evolving serological profile consistent with seroconversion.

Conclusion: These data support the use of HIV DNA PCR tests only as a second line supplemental test to licensed standard HIV diagnostic testing strategies, and should be used with care in cases where non-B subtype infection is a possibility.

Publication types

  • Case Reports

MeSH terms

  • AIDS Serodiagnosis / methods
  • Base Sequence
  • DNA Primers / genetics
  • DNA, Viral / blood
  • DNA, Viral / genetics
  • False Negative Reactions
  • HIV Antibodies / blood
  • HIV Core Protein p24 / blood
  • HIV Infections / diagnosis*
  • HIV Infections / transmission
  • HIV Infections / virology
  • HIV Seropositivity / diagnosis
  • HIV Seropositivity / immunology
  • HIV Seropositivity / virology
  • HIV-1 / genetics*
  • HIV-1 / isolation & purification*
  • Humans
  • Polymerase Chain Reaction / methods*
  • Proviruses / genetics
  • Proviruses / isolation & purification
  • Thailand
  • Time Factors

Substances

  • DNA Primers
  • DNA, Viral
  • HIV Antibodies
  • HIV Core Protein p24