Mechanism of binding of warfarin enantiomers to recombinant domains of human albumin

Arch Biochem Biophys. 2003 Jun 1;414(1):83-90. doi: 10.1016/s0003-9861(03)00173-5.

Abstract

Domain fragments of human serum albumin corresponding to domains 1 and 2 (D12) and domains 2 and 3 (D23) were expressed in yeast. The kinetics of warfarin binding to these fragments were investigated using stopped-flow fluorescence spectroscopy. Binding can be characterized by a two-step process, a rapid diffusion-controlled step and a slower rate-limiting step in which a stable drug-protein complex is formed. The equilibrium constant for step 1 is greater for both D12 and D23 than for albumin, probably as a result of reduced steric hindrance offered by the domain fragments. Binding step 2, thought to be the result of a conformational change as warfarin is accommodated by the protein, is faster for D12 and D23. Albumin and the domain fragments show an increased preference for the R enantiomer, but the preference is particularly enhanced for domain fragment D12. These preferences can largely be explained by the domains having different rates for step 2 of the binding process.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cloning, Molecular
  • Gene Expression Regulation
  • Humans
  • Kinetics
  • Peptide Fragments / biosynthesis
  • Peptide Fragments / chemistry*
  • Peptide Fragments / genetics
  • Peptide Fragments / isolation & purification
  • Protein Binding
  • Protein Structure, Tertiary
  • Recombinant Fusion Proteins / biosynthesis
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / isolation & purification
  • Serum Albumin / biosynthesis
  • Serum Albumin / chemistry*
  • Serum Albumin / genetics
  • Serum Albumin / isolation & purification
  • Stereoisomerism
  • Warfarin / chemistry*
  • Yeasts / chemistry
  • Yeasts / genetics
  • Yeasts / metabolism

Substances

  • Peptide Fragments
  • Recombinant Fusion Proteins
  • Serum Albumin
  • Warfarin