Redox-induced structural dynamics of Fe-heme ligand in myoglobin by X-ray absorption spectroscopy

Biophys J. 2003 Jul;85(1):549-58. doi: 10.1016/S0006-3495(03)74499-3.

Abstract

The Fe(III) --> Fe(II) reduction of the heme iron in aquomet-myoglobin, induced by x-rays at cryogenics temperatures, produces a thermally trapped nonequilibrium state in which a water molecule is still bound to the iron. Water dissociates at T > 160 K, when the protein can relax toward its new equilibrium, deoxy form. Synchrotron radiation x-ray absorption spectroscopy provides information on both the redox state and the Fe-heme structure. Owing to the development of a novel method to analyze the low-energy region of x-ray absorption spectroscopy, we obtain structural pictures of this photo-inducible, irreversible process, with 0.02-0.06-A accuracy, on the protein in solution as well as in crystal. After photo-reduction, the iron-proximal histidine bond is shortened by 0.15 A, a reinforcement that should destabilize the iron in-plane position favoring water dissociation. Moreover, we are able to get the distance of the water molecule even after dissociation from the iron, with a 0.16-A statistical error.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Absorptiometry, Photon / methods*
  • Computer Simulation
  • Crystallography / methods
  • Energy Transfer
  • Heme / chemistry*
  • Heme / radiation effects
  • Iron / chemistry*
  • Iron / radiation effects
  • Ligands
  • Models, Molecular*
  • Myoglobin / chemistry*
  • Myoglobin / radiation effects*
  • Oxidation-Reduction
  • Protein Conformation
  • Spectrometry, X-Ray Emission / methods*
  • Water / chemistry*

Substances

  • Ligands
  • Myoglobin
  • Water
  • Heme
  • Iron