Mapping of the epitope/paratope interactions of a monoclonal antibody directed against adenosine 3',5'-monophosphate

Biochem J. 1992 Jul 1;285 ( Pt 1)(Pt 1):129-36. doi: 10.1042/bj2850129.

Abstract

A series of systematically modified cyclic AMP (cAMP) analogues, including newly synthesized benzimidazole ribofuranosyl 3',5'-monophosphates was used to map the essential molecular interactions between cAMP and the monoclonal antibody 4/2C2 (mab 4/2C2) directed against 2'-O-succinoyl cAMP [Colling, Gilles, Nass, Moka & Jaenicke (1988) Second Messengers Phosphoproteins 12, 123-133]. Its paratope binds the purine base in syn conformation by dipole-dipole interactions and hydrophobic forces and/or stacking interactions. The ribose phosphate moiety is recognized by a combination of charge interactions and H-bonds to the exocyclic and the 5'-oxygen atoms and a hydrophobic interaction at the 2'-position. There is no regioselectivity for the exocyclic oxygen atoms. Compared with the known types of binding, mab 4/2C2 thus shows a new combination of molecular interactions which may be the basis of its strikingly specific recognition and binding of the cyclic adenylates. On this account mab 4/2C2 may become an important tool in studies on cAMP metabolism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Monoclonal / immunology*
  • Antibody Specificity
  • Binding Sites, Antibody / chemistry
  • Chromatography, Affinity
  • Cyclic AMP / analogs & derivatives
  • Cyclic AMP / analysis
  • Cyclic AMP / chemistry
  • Cyclic AMP / immunology*
  • Epitopes / immunology*
  • Molecular Conformation
  • Receptors, Cyclic AMP / chemistry

Substances

  • Antibodies, Monoclonal
  • Epitopes
  • Receptors, Cyclic AMP
  • Cyclic AMP