The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3'UTR

Genes Dev. 2004 Jan 15;18(2):132-7. doi: 10.1101/gad.1165404. Epub 2004 Jan 16.

Abstract

Caenorhabditis elegans let-7, a founding member of the microRNA family, is predicted to bind to six sites in the 3'UTR of the mRNA of its target gene, lin-41, to down-regulate LIN-41. Here, we demonstrate that wild-type let-7 microRNA binds in vitro to RNA from the lin-41 3'UTR. This interaction is dependent on two conserved let-7 complementary sites (LCSs). A 27-nucleotide sequence between the LCSs is also necessary for down-regulation in vivo. LCS mutations compensatory to the lesion in let-7(n2853) can partially restore lin-41 3'UTR function in a let-7(n2853) background, providing the first experimental evidence for an animal miRNA binding directly to its validated target in vivo.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • 3' Untranslated Regions
  • Animals
  • Binding Sites
  • Caenorhabditis elegans / genetics
  • Caenorhabditis elegans / metabolism
  • Caenorhabditis elegans Proteins / genetics*
  • Caenorhabditis elegans Proteins / metabolism
  • Down-Regulation
  • Gene Expression Regulation / physiology*
  • MicroRNAs / metabolism*
  • Mutation
  • Sequence Analysis, DNA
  • Transcription Factors / genetics*

Substances

  • 3' Untranslated Regions
  • Caenorhabditis elegans Proteins
  • LIN-41 protein, C elegans
  • MicroRNAs
  • Transcription Factors
  • let-7 microRNA, C elegans