EST-PAGE--managing and analyzing EST data

Lakshmi K Matukumalli; John J Grefenstette; Tad S Sonstegard; Curtis P Van Tassell

doi:10.1093/bioinformatics/btg411

EST-PAGE--managing and analyzing EST data

Bioinformatics. 2004 Jan 22;20(2):286-8. doi: 10.1093/bioinformatics/btg411.

Authors

Lakshmi K Matukumalli¹, John J Grefenstette, Tad S Sonstegard, Curtis P Van Tassell

Affiliation

¹ US Department of Agriculture, ARS, Beltsville Agricultural Research Center, Bovine Functional Genomics Laboratory, Beltsville, MD 20705, USA.

PMID: 14734326
DOI: 10.1093/bioinformatics/btg411

Abstract

EST-PAGE provides a bioinformatics solution for expressed sequence tags (EST) data entry, database management, GenBank submission, process control and data retrieval from a unified web interface that can be easily customized and adapted by groups working on diverse EST sequencing projects.

Availability: The system and source code are available upon request from the authors.

Supplementary information: http://EST-PAGE.binf.gmu.edu

MeSH terms

Database Management Systems*
Databases, Nucleic Acid*
Expressed Sequence Tags*
Gene Expression Profiling / methods*
Information Storage and Retrieval / methods*
Sequence Alignment / methods*
Sequence Analysis, DNA / methods*
Software*