A novel method for screening viral interferon-resistance genes

J Interferon Cytokine Res. 2004 Aug;24(8):470-7. doi: 10.1089/1079990041689610.

Abstract

Many viruses have evolved mechanisms to antagonize the interferon (IFN) system, targeting all the major components involved in receptor binding and signaling. Although a number of these vital proteins are homologous to cellular proteins involved in IFN downregulation (e.g., viral IFN regulatory factors [vIRFs]), many share little resemblance to known proteins. To determine the IFN-blocking properties of these proteins, functional assays are required. Here, we present a new and rapid functional screening method, based on the 2fTGH cell line, which is able to determine viral gene products that inhibit the IFN-alpha/Jak-Stat signaling pathway. Expression cloning of viral IFN-blocking genes into 2fTGH and consequent selection with IFN-alpha and 6-thioguanine result in the outgrowth of cells that are no longer responsive to IFN-alpha. We also demonstrate that selection occurs if members of the Jak-Stat signaling pathway are lost. To show the utility of our system, we have used a known suppressor of IFN signaling, the human papillomavirus (HPV) E7 gene. Expression of E7 causes the loss of ability of 2fTGH cells to respond to IFN-alpha treatment because of a functional disruption of the signaling pathway. This approach offers a new strategy for identifying novel viral genes or new functions of already described viral genes that have a role in IFN-alpha signaling inhibition.

MeSH terms

  • Cell Line
  • DNA-Binding Proteins / metabolism
  • Disease Susceptibility
  • Genes, Viral / genetics*
  • Genetic Testing / methods*
  • Humans
  • Interferon-Stimulated Gene Factor 3
  • Interferon-Stimulated Gene Factor 3, gamma Subunit
  • Interferon-alpha / immunology*
  • Interferon-alpha / metabolism
  • Papillomaviridae / genetics
  • Papillomaviridae / immunology
  • Signal Transduction
  • Transcription Factors / metabolism
  • Viral Proteins / genetics
  • Virus Diseases / immunology*
  • Virus Diseases / virology*
  • Viruses / genetics
  • Viruses / immunology

Substances

  • DNA-Binding Proteins
  • IRF9 protein, human
  • Interferon-Stimulated Gene Factor 3
  • Interferon-Stimulated Gene Factor 3, gamma Subunit
  • Interferon-alpha
  • Transcription Factors
  • Viral Proteins