[Detection and sequence analysis of Sapporo-like virus in Guangzhou]

Di Yi Jun Yi Da Xue Xue Bao. 2004 Oct;24(10):1147-9, 1152.
[Article in Chinese]

Abstract

Objective: To verify the presence of Sapporo-like virus (SLV) in children with diarrhea in Guangzhou.

Methods: Stool specimens were collected from children with diarrhea treated in the Department of Pediatrics of Nanfang Hospital in autumn and winter, 2003, and semi-nested reverse transcriptase-polymerase chain reaction (RT-PCR) was employed for SLV detection, the positive product of which was sequenced and analyzed in comparison with the SLV sequences documented in GenBank.

Results: Only one positive specimen (CH03354) was found out of the 169 stool specimens collected. Sequence analysis of the capsid gene of this strain showed that it belonged to SLV GI-1 cluster.

Conclusion: SLV exists in Guangzhou and different regions of China may have different genotypes of this virus.

Publication types

  • English Abstract
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Caliciviridae Infections / virology*
  • Child, Preschool
  • China
  • DNA, Viral / genetics
  • Diarrhea / virology*
  • Female
  • Genotype
  • Humans
  • Infant
  • Male
  • Molecular Sequence Data
  • Sapovirus / genetics*
  • Sapovirus / isolation & purification*
  • Sequence Analysis, DNA

Substances

  • DNA, Viral