Evidence that the Streptomyces developmental protein WhiD, a member of the WhiB family, binds a [4Fe-4S] cluster

J Biol Chem. 2005 Mar 4;280(9):8309-15. doi: 10.1074/jbc.M412622200. Epub 2004 Dec 21.

Abstract

WhiD is required for the late stages of sporulation in the Gram-positive bacterium Streptomyces coelicolor. WhiD is a member of the WhiB-like family of putative transcription factors that are present throughout the actinomycetes but absent from other organisms. This family of proteins has four near-invariant cysteines, suggesting that these residues might act as ligands for a metal cofactor. Overexpressed WhiD, purified from Escherichia coli, contained substoichiometric amounts of iron and had an absorption spectrum characteristic of a [2Fe-2S] cluster. After Fe-S cluster reconstitution under anaerobic conditions, WhiD contained approximately 4 iron atoms/monomer and similar amounts of sulfide ion and gave an absorption spectrum characteristic of a [4Fe-4S] cluster. Reconstituted WhiD gave no electron paramagnetic resonance signal as prepared but, after reduction with dithionite, gave an electron paramagnetic resonance signal (g approximately 2.06, 1.94) consistent with a one-electron reduction of a [4Fe-4S](2+) cluster to a [4Fe-4S](1+) state with electron spin of S = (1/2). The anaerobically reconstituted [4Fe-4S] cluster was oxygen sensitive. Upon exposure to air, absorption at 410 and 505 nm first increased and then showed a steady decrease with time until the protein was colorless in the near UV/visible region. These changes are consistent with an oxygen-induced change from a [4Fe-4S] to a [2Fe-2S] cluster, followed by complete loss of cluster from the protein. Each of the four conserved cysteine residues, Cys-23, -53, -56, and -62, was essential for WhiD function in vivo.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Bacterial Proteins / metabolism
  • Bacterial Proteins / physiology*
  • Cysteine / chemistry
  • Electron Spin Resonance Spectroscopy
  • Electrons
  • Escherichia coli / metabolism
  • Genetic Complementation Test
  • Ions
  • Iron / chemistry
  • Iron-Sulfur Proteins / chemistry*
  • Ligands
  • Magnetics
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Mutation
  • Oxygen / chemistry
  • Polymerase Chain Reaction
  • Protein Binding
  • Protein Structure, Tertiary
  • Sequence Homology, Amino Acid
  • Signal Transduction*
  • Spectrophotometry
  • Streptomyces / metabolism*
  • Sulfides / chemistry
  • Time Factors
  • Transcription Factors / biosynthesis
  • Transcription Factors / metabolism
  • Transcription Factors / physiology*
  • Transcription, Genetic
  • Ultraviolet Rays

Substances

  • Bacterial Proteins
  • Ions
  • Iron-Sulfur Proteins
  • Ligands
  • Sulfides
  • Transcription Factors
  • WhiD protein, Streptomyces coelicolor
  • whiB protein, Streptomyces
  • Iron
  • Cysteine
  • Oxygen