A novel SR-related protein is required for the second step of Pre-mRNA splicing

Mol Cell Biol. 2005 Apr;25(8):2969-80. doi: 10.1128/MCB.25.8.2969-2980.2005.

Abstract

The SR family proteins and SR-related polypeptides are important regulators of pre-mRNA splicing. A novel SR-related protein of an apparent molecular mass of 53 kDa was isolated in a gene trap screen that identifies proteins which localize to the nuclear speckles. This novel protein possesses an arginine- and serine-rich domain and was termed SRrp53 (for SR-related protein of 53 kDa). In support for a role of this novel RS-containing protein in pre-mRNA splicing, we identified the mouse ortholog of the Saccharomyces cerevisiae U1 snRNP-specific protein Luc7p and the U2AF65-related factor HCC1 as interacting proteins. In addition, SRrp53 is able to interact with some members of the SR family of proteins and with U2AF35 in a yeast two-hybrid system and in cell extracts. We show that in HeLa nuclear extracts immunodepleted of SRrp53, the second step of pre-mRNA splicing is blocked, and recombinant SRrp53 is able to restore splicing activity. SRrp53 also regulates alternative splicing in a concentration-dependent manner. Taken together, these results suggest that SRrp53 is a novel SR-related protein that has a role both in constitutive and in alternative splicing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / genetics
  • Alternative Splicing / physiology*
  • Amino Acid Sequence
  • Animals
  • Cell Nucleus / chemistry
  • Cloning, Molecular
  • Cytoplasm / chemistry
  • HeLa Cells
  • Humans
  • Mice
  • Molecular Sequence Data
  • Nuclear Proteins / metabolism
  • RNA Precursors / metabolism*
  • RNA Splice Sites / genetics
  • RNA, Messenger / metabolism*
  • RNA-Binding Proteins / analysis
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism
  • RNA-Binding Proteins / physiology*
  • Sequence Homology, Amino Acid
  • Two-Hybrid System Techniques

Substances

  • HCC1 autoantigen
  • LUC7L3 protein, human
  • Nuclear Proteins
  • RNA Precursors
  • RNA Splice Sites
  • RNA, Messenger
  • RNA-Binding Proteins
  • SRrp53 protein, mouse