Paenibacillus rhizosphaerae sp. nov., isolated from the rhizosphere of Cicer arietinum

Int J Syst Evol Microbiol. 2005 May;55(Pt 3):1305-1309. doi: 10.1099/ijs.0.63513-0.

Abstract

Two sporulating bacterial strains designated CECAP06(T) and CECAP16 were isolated from the rhizosphere of the legume Cicer arietinum in Argentina. Almost-complete 16S rRNA gene sequences identified the isolates as a Paenibacillus species. It was most closely related to Paenibacillus cineris LMG 18439(T) (99.6 % sequence similarity), Paenibacillus favisporus LMG 20987(T) (99.4 % sequence similarity) and Paenibacillus azoreducens DSM 13822(T) (97.7 % sequence similarity). The cells of this novel species were motile, sporulating, rod-shaped, Gram-positive and strictly aerobic. The predominant fatty acids were anteiso-C(15 : 0), C(16 : 0) and iso-C(16 : 0). The DNA G+C content of strains CECAP06(T) and CECAP16 was 51.3 and 50.9 mol%, respectively. Growth was observed from many carbohydrates, but gas production was not observed from glucose. Catalase and oxidase activities were present. The isolates produced beta-galactosidase and hydrolysed aesculin. Gelatinase, caseinase and urease were not produced. The results of DNA-DNA hybridization showed that the strains from this study constitute a novel species of the genus Paenibacillus, for which the name Paenibacillus rhizosphaerae sp. nov. is proposed. The type strain is CECAP06(T) (=LMG 21955(T) = CECT 5831(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Argentina
  • Base Composition
  • Carbohydrate Metabolism
  • Catalase / analysis
  • Cicer / microbiology*
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Esculin / metabolism
  • Fatty Acids / analysis
  • Fatty Acids / isolation & purification
  • Genes, rRNA
  • Gentian Violet
  • Gram-Positive Endospore-Forming Rods / classification*
  • Gram-Positive Endospore-Forming Rods / cytology
  • Gram-Positive Endospore-Forming Rods / isolation & purification*
  • Gram-Positive Endospore-Forming Rods / physiology
  • Molecular Sequence Data
  • Movement
  • Nucleic Acid Hybridization
  • Oxidoreductases / analysis
  • Phenazines
  • Phylogeny
  • Plant Roots / microbiology*
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Spores, Bacterial
  • beta-Glucosidase / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Gram's stain
  • Phenazines
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Esculin
  • Oxidoreductases
  • Catalase
  • beta-Glucosidase
  • Gentian Violet

Associated data

  • GENBANK/AY751754
  • GENBANK/AY751755