Information-theoretic approach to network modularity

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Apr;71(4 Pt 2):046117. doi: 10.1103/PhysRevE.71.046117. Epub 2005 Apr 14.

Abstract

Exploiting recent developments in information theory, we propose, illustrate, and validate a principled information-theoretic algorithm for module discovery and the resulting measure of network modularity. This measure is an order parameter (a dimensionless number between 0 and 1). Comparison is made with other approaches to module discovery and to quantifying network modularity (using Monte Carlo generated Erdös-like modular networks). Finally, the network information bottleneck (NIB) algorithm is applied to a number of real world networks, including the "social" network of co-authors at the 2004 APS March Meeting.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Algorithms
  • Bacterial Physiological Phenomena
  • Biophysics / methods*
  • Computer Simulation
  • Escherichia coli / physiology
  • Models, Statistical
  • Monte Carlo Method
  • Neural Networks, Computer
  • Systems Analysis
  • Systems Theory*
  • Transcription, Genetic