Formate binding near the redox-active tyrosineD in photosystem II: consequences on the properties of tyrD

Photosynth Res. 2005 Jun;84(1-3):139-44. doi: 10.1007/s11120-005-0637-x.

Abstract

Formate and phosphate affect substantially the rate of tyrosine D (TyrD) oxidation and the stability of the radical TyrD* in Photosystem II [Hienerwadel R, Boussac A, Breton J and Berthomieu C (1996) Biochemistry 35: 15447-15460]. This observation prompted us to analyze the influence of formate and phosphate on the environment of TyrD using FTIR spectroscopy. The nu (CO) IR mode of TyrD* at 1503 cm-1 remains unchanged whatever the buffer used at pH 6 and whether formate is present or not in the sample. Similarly, the main IR mode of reduced TyrD remains at approximately 1250 cm-1 in all tested conditions. We thus conclude that formate does not modify the hydrogen-bonded interactions of TyrD and TyrD* with neighbouring D2His189 and D2Gln164. In the TyrD-state, an IR mode of formate significantly different from that observed in solution, is detected using 13C-formate, showing that formate forms a strong electrostatic interaction within PS II. The presence of formate affects also IR bands that may be assigned to an arginine side chain. Upon TyrD* formation, formate does not protonate but its binding interaction weakens. A proton uptake by Mes or phosphate buffer is detected, which is not observed when BisTris is used as a buffer. In these latter conditions, IR bands characteristic of the protonation of a carboxylate group of the protein are detected instead. The present IR data and the recent structural model of the TyrD environment proposed by Ferreira KN, Iverson TM, Maghlaoui K, Barber J and Iwata S [(2004) Science 303: 1831-1838], suggest that the proton released upon TyrD* formation is shared within a hydrogen bonding network including D2Arg294, and CP47Glu364 and that perturbation of this network by formate - possibly binding near D2Arg294 - substantially affects the properties of TyrD.

MeSH terms

  • Amino Acid Sequence
  • Formates / chemistry
  • Formates / metabolism*
  • Hydrogen Bonding
  • Oxidation-Reduction
  • Photosystem II Protein Complex / chemistry*
  • Photosystem II Protein Complex / metabolism*
  • Protein Binding
  • Protein Conformation
  • Spectroscopy, Fourier Transform Infrared
  • Spinacia oleracea / metabolism
  • Synechocystis / metabolism
  • Thylakoids / metabolism
  • Tyrosine / chemistry*
  • Tyrosine / metabolism*

Substances

  • Formates
  • Photosystem II Protein Complex
  • formic acid
  • Tyrosine