In Burkina Faso, Glossina palpalis gambiensis Vanderplank and G. tachinoides Westwood (Diptera: Glossinidae) are the main cyclic vectors of trypanosomiasis. The vegetation type along river banks is an important factor determining the distribution and abundance of these tsetse. The following work investigated the relation between the plant species present (including the disturbance level) and tsetse distribution and abundance, using three ecotypes, described by P.C. Morel in 1978. These were the Guinean, Sudano-Guinean and Sudanese gallery forests. In the Mouhoun River basin, these three ecotypes are found successively from upstream to downstream. Berlinia grandiflora, Syzygium guineense and Cola laurifolia and finally Acacia seyal and Mitragyna inermis were the best indicators for the Guinean, Sudano-Guinean and Sudanese gallery forest ecotypes, respectively, as suggested by Morel. However, other species such as Pterocarpus santalinoides and Mimosa pigra were not ecotype specific. Trap catches confirmed that G. palpalis and G. tachinoides are predominant in Guinean and Sudanese gallery forests, respectively, and that both species are well represented in the Sudano-Guinean ecotype. Tsetse densities dropped significantly in disturbed Sudano-Guinean and Sudanese gallery forest sites. However, this was not the case for both species in Guinean or for G. tachinoides in half-disturbed Sudanese gallery forest sites, confirming their high resilience to human-made changes. The importance of a detailed consideration of riverine ecotypes when predicting tsetse densities is discussed.