RT-PCR based diagnosis revealed importance of human group B rotavirus infection in childhood diarrhoea

J Clin Virol. 2006 Jul;36(3):222-7. doi: 10.1016/j.jcv.2006.02.009. Epub 2006 Jun 9.

Abstract

Background: Human group B rotavirus was first identified as causative agent of a large outbreak of severe gastroenteritis affecting more than 1 million people, predominantly adults in China in 1982-1983. In spite of serological evidences for the presence of group B rotavirus in many countries of the world, the virus has been detected only from China, India and Bangladesh, where most of the cases were from adults.

Objectives: To ascertain the role of group B rotavirus as an aetiological agent of diarrhoea among children in Kolkata, India.

Study design: An active surveillance was conducted for rotavirus infection in children in a leading referral paediatric hospital and a few samples were also collected from adults of another hospital in Kolkata, India over a period of 3 years (2002-2004). After primary screening of rotaviruses by RNA electrophoresis in polyacrylamide gel, 200 of 412 samples negative by PAGE were screened by reverse transcription polymerase chain reaction for group B rotaviruses. The group B rotavirus positives samples were also confirmed by dot-blot hybridization.

Result: During the study period, we detected 37 (18.5%) sporadic cases of human group B rotavirus infection in children below 3 years of age of which 15 (7.5%) showed mixed infection with group A rotaviruses by RT-PCR. In dot-blot hybridization studies the RNA of all rotavirus positive samples hybridized with the nonisotopic psoralen-biotin labeled total RNA probe generated from a human group B rotavirus CAL-1 strain confirming the samples as group B rotaviruses.

Conclusion: The shift in age preference of group B rotavirus infection from adult to children and mixed infection of group B and group A rotaviruses reveals the importance of group B rotavirus as an etiological agent of childhood diarrhoea. Therefore, future vaccination strategy should include both group A and B rotaviruses to control rotavirus diarrhoea.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Child, Preschool
  • Diarrhea / diagnosis*
  • Diarrhea / virology*
  • Electrophoresis, Polyacrylamide Gel
  • Humans
  • Incidence
  • India / epidemiology
  • Infant
  • Infant, Newborn
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Reverse Transcriptase Polymerase Chain Reaction / methods*
  • Rotavirus / genetics
  • Rotavirus / isolation & purification*
  • Rotavirus Infections / diagnosis*
  • Rotavirus Infections / virology*
  • Sequence Analysis, DNA

Associated data

  • GENBANK/AY864913
  • GENBANK/AY864914
  • GENBANK/AY941776
  • GENBANK/AY941777
  • GENBANK/AY941778
  • GENBANK/AY941779
  • GENBANK/AY941789
  • GENBANK/AY941790
  • GENBANK/AY941791
  • GENBANK/AY941792