A novel haem-binding interface in the 22 kDa haem-binding protein p22HBP

J Mol Biol. 2006 Sep 15;362(2):287-97. doi: 10.1016/j.jmb.2006.07.010. Epub 2006 Aug 14.

Abstract

The 22 kDa haem-binding protein, p22HBP, is highly expressed in erythropoietic tissues and binds to a range of metallo- and non-metalloporphyrin molecules with similar affinities, suggesting a role in haem regulation or synthesis. We have determined the three-dimensional solution structure of p22HBP and mapped the porphyrin-binding site, which comprises a number of loops and a alpha-helix all located on a single face of the molecule. The structure of p22HBP is related to the bacterial multi-drug resistance protein BmrR, and is the first protein with this fold to be identified in eukaryotes. Strikingly, the porphyrin-binding site in p22HBP is located in a similar position to the drug-binding site of BmrR. These similarities suggest that the broad ligand specificity observed for both BmrR and p22HBP may result from a conserved ligand interaction mechanism. Taken together, these data suggest that the both the fold and its associated function, that of binding to a broad range of small hydrophobic molecules, are ancient, and have been adapted throughout evolution for a variety of purposes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Binding Sites
  • Carrier Proteins / chemistry*
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism
  • Circular Dichroism
  • Heme / metabolism*
  • Heme-Binding Proteins
  • Hemeproteins / chemistry*
  • Hemeproteins / genetics
  • Hemeproteins / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Porphyrins / chemistry
  • Porphyrins / metabolism*
  • Protein Binding
  • Protein Structure, Secondary*
  • Protein Structure, Tertiary*
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Sequence Alignment
  • Trans-Activators / chemistry
  • Trans-Activators / metabolism

Substances

  • Bacterial Proteins
  • BmrR protein, bacteria
  • Carrier Proteins
  • Heme-Binding Proteins
  • Hemeproteins
  • Porphyrins
  • Recombinant Fusion Proteins
  • Trans-Activators
  • Heme