Identification and Characterization of a Schizosaccharomyces pombe RNA Polymerase II Elongation Factor with Similarity to the Metazoan Transcription Factor ELL

J Biol Chem. 2007 Feb 23;282(8):5761-9. doi: 10.1074/jbc.M610393200. Epub 2006 Dec 6.

Abstract

ELL family transcription factors activate the rate of transcript elongation by suppressing transient pausing by RNA polymerase II at many sites along the DNA. ELL-associated factors 1 and 2 (EAF1 and EAF2) bind stably to ELL family members and act as strong positive regulators of their transcription activities. Orthologs of ELL and EAF have been identified in metazoa, but it has been unclear whether such RNA polymerase II elongation factors are utilized in lower eukaryotes. Using bioinformatic and biochemical approaches, we have identified a new Schizosaccharomyces pombe RNA polymerase II elongation factor that is composed of two subunits designated SpELL and SpEAF, which share weak sequence similarity with members of the metazoan ELL and EAF families. Like mammalian ELL-EAF, SpELL-SpEAF stimulates RNA polymerase II transcription elongation and pyrophosphorolysis. In addition, like many yeast RNA polymerase II elongation factors, deletion of the SpELL gene renders S. pombe sensitive to the drug 6-azauracil. Finally, phylogenetic analyses suggest that the SpELL and SpEAF proteins are evolutionarily conserved in many fungi but not in Saccharomyces cerevisiae.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antimetabolites / pharmacology
  • Evolution, Molecular*
  • Humans
  • Molecular Sequence Data
  • RNA Polymerase II / genetics*
  • RNA Polymerase II / metabolism
  • Schizosaccharomyces / genetics*
  • Schizosaccharomyces pombe Proteins / genetics*
  • Schizosaccharomyces pombe Proteins / metabolism
  • Sequence Homology, Amino Acid
  • Species Specificity
  • Spodoptera
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism
  • Transcription, Genetic / drug effects
  • Transcription, Genetic / physiology*
  • Transcriptional Elongation Factors / genetics*
  • Transcriptional Elongation Factors / metabolism
  • Uracil / analogs & derivatives
  • Uracil / pharmacology

Substances

  • Antimetabolites
  • EAF1 protein, human
  • EAF2 protein, human
  • Schizosaccharomyces pombe Proteins
  • Transcription Factors
  • Transcriptional Elongation Factors
  • eaf1 protein, S pombe
  • ell1 protein, S pombe
  • Uracil
  • RNA Polymerase II
  • azauracil

Associated data

  • GENBANK/EF192607