tRNA-dependent cleavage of the ColE1 plasmid-encoded RNA I

Microbiology (Reading). 2006 Dec;152(Pt 12):3467-3476. doi: 10.1099/mic.0.29134-0.

Abstract

Effects of tRNA(Ala)(UGC) and its derivative devoid of the 3'-ACCA motif [tRNA(Ala)(UGC)DeltaACCA] on the cleavage of the ColE1-like plasmid-derived RNA I were analysed in vivo and in vitro. In an amino-acid-starved relA mutant, in which uncharged tRNAs occur in large amounts, three products of specific cleavage of RNA I were observed, in contrast to an otherwise isogenic relA(+) host. Overexpression of tRNA(Ala)(UGC), which under such conditions occurs in Escherichia coli mostly in an uncharged form, induced RNA I cleavage and resulted in an increase in ColE1-like plasmid DNA copy number. Such effects were not observed during overexpression of the 3'-ACCA-truncated tRNA(Ala)(UGC). Moreover, tRNA(Ala)(UGC), but not tRNA(Ala)(UGC)DeltaACCA, caused RNA I cleavage in vitro in the presence of MgCl(2). These results strongly suggest that tRNA-dependent RNA I cleavage occurs in ColE1-like plasmid-bearing E. coli, and demonstrate that tRNA(Ala)(UGC) participates in specific degradation of RNA I in vivo and in vitro. This reaction is dependent on the presence of the 3'-ACCA motif of tRNA(Ala)(UGC).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteriocin Plasmids / genetics*
  • Base Sequence
  • Blotting, Northern
  • Coenzymes / pharmacology
  • DNA, Bacterial / biosynthesis
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Magnesium Chloride / pharmacology
  • Models, Biological
  • Molecular Sequence Data
  • RNA Stability*
  • RNA, Antisense / genetics
  • RNA, Antisense / metabolism
  • RNA, Bacterial / genetics
  • RNA, Bacterial / metabolism*
  • RNA, Catalytic / metabolism*
  • RNA, Transfer, Ala / metabolism*

Substances

  • Coenzymes
  • DNA, Bacterial
  • RNA I
  • RNA, Antisense
  • RNA, Bacterial
  • RNA, Catalytic
  • RNA, Transfer, Ala
  • Magnesium Chloride