The 3' untranslated region complex involved in stabilization of human alpha-globin mRNA assembles in the nucleus and serves an independent role as a splice enhancer

Mol Cell Biol. 2007 May;27(9):3290-302. doi: 10.1128/MCB.02289-05. Epub 2007 Feb 26.

Abstract

Posttranscriptional controls, mediated primarily by RNA-protein complexes, have the potential to alter multiple steps in RNA processing and function. Human alpha-globin mRNA is bound at a C-rich motif in the 3' untranslated region (3'UTR) by the KH domain protein alpha-globin poly(C)-binding protein (alphaCP). This "alpha-complex" is essential to cytoplasmic stability of alpha-globin mRNA in erythroid cells. Here we report that the 3'UTR alpha-complex also serves an independent nuclear role as a splice enhancer. Consistent with this role, we find that alphaCP binds alpha-globin transcripts prior to splicing. Surprisingly, this binding occurs at C-rich sites within intron I as well as at the 3'UTR C-rich determinant. The intronic and 3'UTR alphaCP complexes appear to have distinct effects on splicing. While intron I complexes repress intron I excision, the 3'UTR complex enhances splicing of the full-length transcript both in vivo and in vitro. In addition to its importance to splicing, nuclear assembly of the 3'UTR alphaCP complex may serve to "prepackage" alpha-globin mRNA with its stabilizing complex prior to cytoplasmic export. Linking nuclear and cytoplasmic controls by the action of a particular RNA-binding protein, as reported here, may represent a modality of general importance in eukaryotic gene regulation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics*
  • 3' Untranslated Regions / metabolism
  • Cell Line, Tumor
  • Cell Nucleus / genetics*
  • Globins / genetics*
  • Humans
  • Introns / genetics
  • Molecular Sequence Data
  • Protein Binding
  • RNA Splicing / genetics*
  • RNA Stability / genetics*
  • RNA-Binding Proteins / metabolism
  • Regulatory Sequences, Ribonucleic Acid / genetics*
  • Transcription, Genetic / genetics

Substances

  • 3' Untranslated Regions
  • PCBP2 protein, human
  • RNA-Binding Proteins
  • Regulatory Sequences, Ribonucleic Acid
  • Globins