Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin

Theor Appl Genet. 2007 Apr;114(6):961-70. doi: 10.1007/s00122-006-0481-1. Epub 2007 Mar 14.

Abstract

Milo disease in sorghum is caused by isolates of the soil-borne fungus Periconia circinata that produce PC-toxin. Susceptibility to milo disease is conditioned by a single, semi-dominant gene, termed Pc. The susceptible allele (Pc) converts to a resistant form (pc) spontaneously at a gametic frequency of 10(-3) to 10(-4). A high-density genetic map was constructed around the Pc locus using DNA markers, allowing the Pc gene to be delimited to a 0.9 cM region on the short arm of sorghum chromosome 9. Physically, the Pc-region was covered by a single BAC clone. Sequence analysis of this BAC revealed twelve gene candidates. Several of the predicted genes in the region are homologous to disease resistance loci, including one NBS-LRR resistance gene analogue that is present in multiple tandem copies. Analysis of pc isolines derived from Pc/Pc sorghum suggests that one or more members of this NBS-LRR gene family are the Pc genes that condition susceptibility.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Ascomycota / pathogenicity*
  • Chromosomes, Artificial, Bacterial
  • Chromosomes, Plant
  • Cloning, Molecular
  • Crosses, Genetic
  • DNA, Plant
  • Gene Dosage
  • Gene Duplication
  • Genes, Dominant
  • Genes, Plant*
  • Genetic Markers
  • Genotype
  • Molecular Sequence Data
  • Physical Chromosome Mapping*
  • Polymorphism, Single-Stranded Conformational
  • Recombination, Genetic
  • Sequence Homology, Amino Acid
  • Sorghum / genetics*
  • Toxins, Biological / genetics*

Substances

  • DNA, Plant
  • Genetic Markers
  • Toxins, Biological