Conformational analysis of endomorphin-2 analogs with phenylalanine mimics by NMR and molecular modeling

Bioorg Med Chem. 2007 May 15;15(10):3539-47. doi: 10.1016/j.bmc.2007.02.050. Epub 2007 Mar 3.

Abstract

We investigated a series of conformations of endomorphin-2 (EM-2) analogs substituted by phenylglycine (Phg) and homophenylalanine (Hfe) in the position 3 or 4 by two-dimensional (1)H NMR spectroscopy and molecular modeling. Evaluating the aromatic interactions and the dihedral angles in these phenylalanine mimics, we have observed that the conformations in trans isomer have varied from extended to folded as bioactivity decreases. It is suggested that the flexibility of aromatic side chain affects the backbone of EM-2 to adopt folded structures, which may block the ligands in binding to micro-opioid receptor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / chemistry
  • Dimethyl Sulfoxide
  • Enkephalin, Ala(2)-MePhe(4)-Gly(5)- / chemistry
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Molecular Conformation
  • Molecular Mimicry
  • Oligopeptides / chemical synthesis
  • Oligopeptides / chemistry*
  • Peptides / chemistry
  • Phenylalanine / chemistry*
  • Receptors, Opioid, mu / drug effects

Substances

  • Amino Acids
  • Oligopeptides
  • Peptides
  • Receptors, Opioid, mu
  • Enkephalin, Ala(2)-MePhe(4)-Gly(5)-
  • endomorphin 2
  • Phenylalanine
  • Dimethyl Sulfoxide