PQuad--a visual analysis platform for proteomic data exploration of microbial organisms

Bioinformatics. 2007 Jul 1;23(13):1705-7. doi: 10.1093/bioinformatics/btm132. Epub 2007 May 5.

Abstract

The visual Platform for Proteomics Peptide and Protein data exploration (PQuad) is a multi-resolution environment that visually integrates genomic and proteomic data for prokaryotic systems, overlays categorical annotation and compares differential expression experiments. PQuad requires Java 1.5 and has been tested to run across different operating systems.

Availability: http://ncrr.pnl.gov/software.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Algorithms*
  • Bacterial Physiological Phenomena*
  • Computer Graphics*
  • Gene Expression Profiling / methods*
  • Proteome / physiology*
  • Software*
  • Systems Integration
  • User-Computer Interface*

Substances

  • Proteome