Arctic and Arctic-like rabies viruses: distribution, phylogeny and evolutionary history

Epidemiol Infect. 2008 Apr;136(4):509-19. doi: 10.1017/S095026880700903X. Epub 2007 Jun 29.

Abstract

Forty-one newly sequenced isolates of Arctic and Arctic-like rabies viruses, were genetically compared to each other and to those available from GenBank. Four phylogenetic lineages of Arctic viruses were identified. Arctic-1 viruses circulate in Ontario, Arctic-2 viruses circulate in Siberia and Alaska, Arctic-3 viruses circulate circumpolarly, and a newly described lineage Arctic-4 circulates locally in Alaska. The oldest available isolates from Siberia (between 1950 and 1960) belong to the Arctic-2 and Arctic-3 lineages and share 98.6-99.2% N gene identity with contemporary viruses. Two lineages of Arctic-like viruses were identified in southern Asia and the Middle East (Arctic-like-1) and eastern Asia (Arctic-like-2). A time-scaled tree demonstrates that the time of the most recent common ancestor (TMRCA) of Arctic and Arctic-like viruses is dated between 1255 and 1786. Evolution of the Arctic viruses has occurred through a northerly spread. The Arctic-like-2 lineage diverged first, whereas Arctic viruses share a TMRCA with Arctic-like-1 viruses.

MeSH terms

  • Animals
  • Animals, Wild / virology
  • Arctic Regions / epidemiology
  • Disease Reservoirs
  • Disease Transmission, Infectious
  • Geography
  • Humans
  • Molecular Epidemiology
  • Phylogeny
  • RNA / analysis
  • Rabies / epidemiology*
  • Rabies / transmission
  • Rabies / virology*
  • Rabies virus / classification*
  • Rabies virus / genetics
  • Rabies virus / isolation & purification

Substances

  • RNA