Sequence and functional analysis of mutations in the gene encoding peptide-chain-release factor 2 of Escherichia coli

Biochimie. 1991 Dec;73(12):1509-16. doi: 10.1016/0300-9084(91)90185-4.

Abstract

Mutations in the prfB gene which encodes peptide-chain-release factor 2 of Escherichia coli were defined by DNA sequence analysis. prfB1 and prfB3 substitute lysine and asparagine for glutamate and aspartate at amino acid positions 89 and 143, respectively. Temperature-sensitive mutations, prfB2 and prfB286, each contain the identical substitution of phenylalanine for leucine-328. These mutations suppress UGA but not UAG or UAA. The efficiency of suppression was affected by the neighboring RNA context. The prfB gene encodes a premature UGA stop codon at position 26 and is expressed by +1 frameshifting. The efficiency of natural frameshift was 18% as measured by using the monolysogenic lambda assay vector containing prfB-lacZ fusions, and increased up to 30% in the prfB mutants. These observations can be interpreted as genetic evidence for the autogenous control of RF2 synthesis by frameshifting. Structural and functional organizations of release factors are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Asparagine / chemistry
  • Blotting, Southern
  • Codon
  • Escherichia coli / genetics*
  • Lysine / chemistry
  • Molecular Sequence Data
  • Mutation
  • Peptide Chain Termination, Translational
  • Peptide Termination Factors / biosynthesis
  • Peptide Termination Factors / genetics*
  • Protein Biosynthesis
  • Suppression, Genetic

Substances

  • Codon
  • Peptide Termination Factors
  • peptide chain termination release factor 2
  • Asparagine
  • Lysine