Cloning and molecular characterization of a novel x-type glutenin gene Glu-D(t)1 from Aegilops tauschii

Mol Biol Rep. 2009 May;36(5):1195-202. doi: 10.1007/s11033-008-9297-1. Epub 2008 Jul 2.

Abstract

A novel gene encoding an x-type high molecular weight glutenin subunit (HMW-GS), designated 1Dx1.1(t), was isolated from Aegilops tauschii. It is the largest HMW-GS gene reported so far in this species and its product has a slower mobility than that of subunit 1Ax1 in SDS-PAGE. The open reading frame (ORF) of the gene was 2,628 bp, encoding a protein of 874 amino acid residues. Comparisons of amino acid sequences showed that subunit 1Dx1.1(t) had high similarity with other 1Dx subunits but also had two unique characteristics. Firstly, a tripeptide of consensus LQE present in the N-terminal domains of other 1Dx subunits was absent from subunit Dx1.1(t). Secondly, three copies of tandem duplications of the tripeptide motif GQQ and a novel tripeptide sequence (GQL) were present in its central repetitive domain. Phylogenetic analysis showed that subunit 1Dx1.1(t) clustered with other known 1Dx subunits.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Cloning, Molecular
  • Electrophoresis, Polyacrylamide Gel
  • Evolution, Molecular
  • Gene Expression Regulation, Plant
  • Glutens / analysis
  • Glutens / chemistry
  • Glutens / genetics*
  • Molecular Sequence Data
  • Molecular Weight
  • Open Reading Frames / genetics
  • Phylogeny
  • Poaceae / genetics*
  • Protein Subunits / chemistry
  • Protein Subunits / genetics
  • Sequence Homology, Amino Acid

Substances

  • Protein Subunits
  • Glutens
  • glutenin