A role for Q/N-rich aggregation-prone regions in P-body localization

J Cell Sci. 2008 Aug 1;121(Pt 15):2463-72. doi: 10.1242/jcs.024976. Epub 2008 Jul 8.

Abstract

P-bodies are cytoplasmic foci that are sites of mRNA degradation and translational repression. It is not known what causes the accumulation of RNA-degradation factors in P-bodies, although RNA is required. The yeast Lsm1-7p complex (comprising Lsm1p to Lsm7p) is recruited to P-bodies under certain stress conditions. It is required for efficient decapping and degradation of mRNAs, but not for the assembly of P-bodies. Here we show that the Lsm4p subunit and its asparagine-rich C-terminus are prone to aggregation, and that this tendency to aggregate promotes efficient accumulation of Lsm1-7p in P-bodies. The presence of glutamine- and/or asparagine-rich (Q/N-rich) regions in other P-body components suggests a more general role for aggregation-prone residues in P-body localization and assembly. This is supported by reduced P-body accumulation of Ccr4p, Pop2p and Dhh1p after deletion of these domains, and by the observed aggregation of the Q/N-rich region from Ccr4p.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Asparagine / analysis*
  • Asparagine / metabolism
  • Cytoplasm / metabolism
  • Cytoplasmic Granules / metabolism*
  • Glutamine / analysis*
  • Glutamine / metabolism
  • Molecular Sequence Data
  • RNA Stability / physiology
  • RNA, Messenger / metabolism*
  • Ribonucleoprotein, U4-U6 Small Nuclear / chemistry*
  • Ribonucleoprotein, U4-U6 Small Nuclear / genetics
  • Ribonucleoprotein, U4-U6 Small Nuclear / physiology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / chemistry*
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / physiology*

Substances

  • LSM4 protein, S cerevisiae
  • RNA, Messenger
  • Ribonucleoprotein, U4-U6 Small Nuclear
  • Saccharomyces cerevisiae Proteins
  • Glutamine
  • Asparagine