Gene- and strand-specific repair in vitro: partial purification of a transcription-repair coupling factor

Proc Natl Acad Sci U S A. 1991 Sep 15;88(18):8232-6. doi: 10.1073/pnas.88.18.8232.

Abstract

In eukaryotic and prokaryotic cells, activity transcribed genes and, in some instances, the template strand of these genes have been found to be repaired 2-10 times more rapidly than nontranscribed genes or the coding strand of transcribed genes. We demonstrate here gene- and template strand-specific repair synthesis in vitro by using an Escherichia coli cell-free extract and a plasmid carrying a gene with the strong tac promoter. Strand-specific repair of UV, 4'-hydroxymethyl1-4,5',8-trimethylpsoralen, and cis-dicholorodiammine platinum(II) damage was dependent upon transcription and a functional nucleotide excision repair system and was stimulated by 6% (wt/vol) polyethylene glycol. A defined system consisting of the transcription and repair proteins in highly purified form did not perform strand-specific repair; however, active fractions of extract conferred strand specificity to the defined system. Transcription-repair coupling activity was partially purified from extract by successive DEAE-agarose and gel filtration chromatography. The coupling factor is heat-labile, with an estimated Mr of 100,000.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Bacterial Proteins / isolation & purification
  • Cell-Free System
  • Cisplatin / toxicity
  • DNA Damage
  • DNA Repair*
  • Escherichia coli / genetics*
  • Ficusin / toxicity
  • In Vitro Techniques
  • Restriction Mapping
  • Transcription, Genetic*
  • Ultraviolet Rays

Substances

  • Bacterial Proteins
  • Ficusin
  • Cisplatin