Differentiation stage-specific expression of microRNAs in B lymphocytes and diffuse large B-cell lymphomas

Blood. 2009 Apr 16;113(16):3754-64. doi: 10.1182/blood-2008-10-184077. Epub 2008 Dec 1.

Abstract

miRNAs are small RNA molecules binding to partially complementary sites in the 3'-UTR of target transcripts and repressing their expression. miRNAs orchestrate multiple cellular functions and play critical roles in cell differentiation and cancer development. We analyzed miRNA profiles in B-cell subsets during peripheral B-cell differentiation as well as in diffuse large B-cell lymphoma (DLBCL) cells. Our results show temporal changes in the miRNA expression during B-cell differentiation with a highly unique miRNA profile in germinal center (GC) lymphocytes. We provide experimental evidence that these changes may be physiologically relevant by demonstrating that GC-enriched hsa-miR-125b down-regulates the expression of IRF4 and PRDM1/BLIMP1, and memory B cell-enriched hsa-miR-223 down-regulates the expression of LMO2. We further demonstrate that although an important component of the biology of a malignant cell is inherited from its nontransformed cellular progenitor-GC centroblasts-aberrant miRNA expression is acquired upon cell transformation. A 9-miRNA signature was identified that could precisely differentiate the 2 major subtypes of DLBCL. Finally, expression of some of the miRNAs in this signature is correlated with clinical outcome of uniformly treated DLBCL patients.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing
  • B-Lymphocyte Subsets / metabolism*
  • Cell Differentiation*
  • DNA-Binding Proteins / biosynthesis
  • Gene Expression Regulation, Neoplastic*
  • Germinal Center / metabolism
  • Humans
  • Immunologic Memory
  • Interferon Regulatory Factors / biosynthesis
  • LIM Domain Proteins
  • Lymphoma, Large B-Cell, Diffuse / metabolism*
  • Metalloproteins / biosynthesis
  • MicroRNAs / metabolism*
  • Neoplasm Proteins / biosynthesis
  • Positive Regulatory Domain I-Binding Factor 1
  • Proto-Oncogene Proteins
  • RNA, Neoplasm / metabolism*
  • Repressor Proteins / biosynthesis

Substances

  • Adaptor Proteins, Signal Transducing
  • DNA-Binding Proteins
  • Interferon Regulatory Factors
  • LIM Domain Proteins
  • LMO2 protein, human
  • MIRN125 microRNA, human
  • MIRN223 microRNA, human
  • Metalloproteins
  • MicroRNAs
  • Neoplasm Proteins
  • Proto-Oncogene Proteins
  • RNA, Neoplasm
  • Repressor Proteins
  • interferon regulatory factor-4
  • PRDM1 protein, human
  • Positive Regulatory Domain I-Binding Factor 1