Chryseobacterium hungaricum sp. nov., isolated from hydrocarbon-contaminated soil

Int J Syst Evol Microbiol. 2008 Dec;58(Pt 12):2748-54. doi: 10.1099/ijs.0.65847-0.

Abstract

The taxonomic position of a strain isolated from kerosene-contaminated soil in Hungary and formerly misidentified as Brevundimonas vesicularis was examined using a polyphasic approach. The isolate, designated CHB-20p(T), could be clearly assigned to the genus Chryseobacterium (family Flavobacteriaceae) on the basis of 16S rRNA gene sequence similarity. Strain CHB-20p(T), a moderate oil degrader, was a Gram-negative, aerobic, mesophilic microbe with a temperature optimum of 28-30 degrees C. Predominant fatty acids were iso-C(15 : 0), summed feature 3 (comprising C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH) and iso-C(17 : 0) 3-OH. Menaquinone-6 (MK-6) was the predominant respiratory quinone; MK-5 was present as a minor component. The almost complete 16S rRNA gene sequence of strain CHB-20p(T) shared 94-97 % similarity with sequences of the type strains of species of the genus Chryseobacterium. DNA-DNA relatedness between strain CHB-20p(T) and its closest relative, Chryseobacterium caeni, was lower than 46 %. Moreover, several diagnostic phenotypic properties distinguished strain CHB-20p(T) from C. caeni. On the basis of biochemical, chemotaxonomic and genotypic data, isolate CHB-20p(T) represents a novel species within the genus Chryseobacterium, Chryseobacterium hungaricum sp. nov.; the type strain is CHB-20p(T) (=NCAIM B2269(T)=DSM 19684(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chryseobacterium / chemistry
  • Chryseobacterium / classification*
  • Chryseobacterium / genetics
  • Chryseobacterium / physiology*
  • Fatty Acids / analysis
  • Hydrocarbons
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Soil Microbiology*
  • Soil Pollutants
  • Species Specificity

Substances

  • Fatty Acids
  • Hydrocarbons
  • RNA, Ribosomal, 16S
  • Soil Pollutants

Associated data

  • GENBANK/EF685359