Identification of alternatively spliced TIMP-1 mRNA in cancer cell lines and colon cancer tissue

Mol Oncol. 2007 Sep;1(2):205-15. doi: 10.1016/j.molonc.2007.05.002. Epub 2007 May 21.

Abstract

TIMP-1 is a promising new candidate as a prognostic marker in colorectal and breast cancer. We now describe the discovery of two alternatively spliced variants of TIMP-1 mRNA. The two variants lacking exon 2 (del-2) and 5 (del-5), respectively, were identified in human cancer cell lines by RT-PCR. The del-2 variant was, furthermore, detected in extracts from 12 colorectal cancer tissue samples. By western blotting additional bands of lower molecular mass than full-length TIMP-1 were identified in tumor tissue, but not in plasma samples obtained from cancer patients. The two splice variants of TIMP-1 may hold important clinical information, and either alone or in combination with measurement of full-length TIMP-1 they may improve the prognostic and/or predictive value of TIMP-1 analyses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Biomarkers, Tumor / biosynthesis*
  • Breast Neoplasms / metabolism
  • Colonic Neoplasms / diagnosis
  • Colonic Neoplasms / metabolism*
  • Exons
  • Female
  • HL-60 Cells
  • Humans
  • Male
  • Neoplasm Proteins / biosynthesis*
  • Prognosis
  • RNA, Messenger / biosynthesis*
  • RNA, Neoplasm / biosynthesis*
  • Tissue Inhibitor of Metalloproteinase-1 / biosynthesis*

Substances

  • Biomarkers, Tumor
  • Neoplasm Proteins
  • RNA, Messenger
  • RNA, Neoplasm
  • Tissue Inhibitor of Metalloproteinase-1