Evaluating the potential impact of mismatches outside the antigen recognition site in unrelated hematopoietic stem cell transplantation: HLA-DRB1*1454 and DRB1*140101

Tissue Antigens. 2009 Jun;73(6):595-8. doi: 10.1111/j.1399-0039.2009.01245.x. Epub 2009 Apr 6.

Abstract

DNA sequencing of 268 individuals drawn from four US populations carrying two unresolved DRB1*14 alleles differing only outside the antigen recognition site identified DRB1*1454 in the majority. A database of 4222 human leukocyte antigen (HLA)-matched hematopoietic stem cell transplantation donor-recipient pairs was queried to determine the number likely mismatched for DRB1*140101/DRB1*1454 but matched for class I loci. A power calculation suggests that more than 88,000 transplants among European Americans will be needed to identify sufficient 7/8 allele-matched pairs to evaluate the impact of the DRB1*140101/DRB1*1454 mismatch on transplant outcome. Molecular modeling of the HLA-DR interaction with the T-cell receptor and with CD4 suggests that the amino acid substitution distinguishing the two alleles will have minimal impact on allorecognition.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alleles
  • Amino Acid Substitution / genetics
  • Base Pair Mismatch*
  • CD4 Antigens / chemistry
  • CD4 Antigens / immunology
  • CD4 Antigens / metabolism
  • DNA Mutational Analysis
  • Gene Frequency / genetics*
  • HLA-DR Antigens / chemistry
  • HLA-DR Antigens / genetics*
  • HLA-DRB1 Chains
  • Hematopoietic Stem Cell Transplantation
  • Humans
  • Polymorphism, Genetic
  • Retrospective Studies

Substances

  • CD4 Antigens
  • HLA-DR Antigens
  • HLA-DRB1 Chains
  • HLA-DRB1*14:01 antigen
  • HLA-DRB1*14:54 antigen